How do Janssen vaccine side effects compare to mRNA vaccines?

Checked on December 3, 2025
Disclaimer: Factually can make mistakes. Please verify important information or breaking news. Learn more.

Executive summary

Janssen (Ad26 viral‑vector) vaccines tend to cause the familiar short‑term injection‑site pain and flu‑like reactions but have been linked in surveillance to very rare neurologic and clotting events such as Guillain‑Barré syndrome (GBS) and thrombotic events, while mRNA vaccines (Pfizer/Moderna) show higher rates of transient reactogenicity (fever, headache, muscle pain) and a recognized, rare myocarditis/pericarditis signal particularly in younger males [1] [2] [3] [4]. Large comparative safety studies and pharmacovigilance reviews find that serious events are rare for all platforms, but the pattern of rare risks differs by platform: viral‑vector vaccines have been associated with GBS and cerebral venous sinus thrombosis, and mRNA vaccines with myocarditis/pericarditis [5] [4] [6].

1. What people feel the day of the shot — reactogenicity and short‑term symptoms

Clinical trials and real‑world reports show mRNA vaccines commonly produce stronger short‑term reactogenicity — injection‑site pain, fatigue, headache, fever and muscle aches — often more pronounced after a second dose or booster; systematic reviews list injection‑site pain, headache, myalgia, chills and fever as the common reactions to mRNA shots [3] [7]. Observational reports comparing vaccine platforms also show higher self‑reported reactogenicity for mRNA products (Pfizer/Moderna) than for many vector or inactivated vaccines; some studies find Moderna produces the highest reactogenicity among mRNA options [8] [9].

2. Rare but serious risks differ by platform — myocarditis vs GBS and clotting

Large surveillance and regulatory reviews identify distinct rare safety signals. mRNA vaccines carry a small but measurable increased risk of myocarditis and pericarditis, concentrated in adolescents and young adult males (regulatory warnings and cohort analyses report elevated myocarditis rates after Pfizer and Moderna) [10] [6]. By contrast, adenovirus‑vector vaccines such as Janssen have been linked by WHO and regulators to very rare Guillain‑Barré syndrome reports and to thrombotic events in earlier safety reviews — regulators added warnings and advised clinicians to watch for these conditions [4] [11].

3. How common are these events — perspective from large studies

The largest multinational safety studies show these events are very rare relative to doses given. A global cohort study confirmed myocarditis risks after mRNA vaccines and GBS/CVST signals after vector vaccines but stressed the absolute numbers are small among millions vaccinated [5]. Other meta‑analyses quantify small excesses of serious adverse events in trials of mRNA vaccines (for “adverse events of special interest” an estimated excess risk was quantified in trial data), but authors and regulators emphasize that severe outcomes remain uncommon compared with the protection vaccines provide [12].

4. What regulators and clinicians recommend — vigilance and choice

Regulatory bodies and major health centers recommend monitoring for platform‑specific rare events and, when appropriate, using alternative vaccine types for people with a prior severe reaction to one platform; the CDC notes that adverse events can be coincidental and that most common side effects are mild [13]. Clinicians are advised to warn young males about myocarditis symptoms after mRNA doses and to counsel Janssen recipients about rare neurologic or thrombotic warning signs, reflecting the differing risk profiles [10] [4] [13].

5. The tradeoff: reactogenicity versus rare specific risks

The trade‑off reported across sources is that mRNA vaccines provoke higher short‑term reactogenicity but their serious‑event profile centers on myocarditis (rare); Janssen and other adenovirus‑vector vaccines produce fewer day‑of symptoms in some studies but have been tied to rare immune‑mediated events such as GBS and clotting syndromes [8] [9] [4]. Sources stress that for most people the benefits in preventing severe COVID‑19 far outweigh these rare risks, but individual risk factors (age, sex, medical history) can shift the balance for vaccine choice and counseling [5] [13].

6. Limits, disagreements and gaps in reporting

Available sources do not provide a single head‑to‑head randomized trial that quantifies every comparative side‑effect outcome across modern booster formulations; much safety evidence comes from surveillance, systematic review, and varied population studies with different methods and reporting biases [3] [2] [12]. Some sources emphasize higher reactogenicity for mRNA products [9] [8] while surveillance studies focus on different rare events by platform [5] [4]. Those methodological differences explain apparent disagreements in how “safer” a vaccine appears.

7. Bottom line for readers deciding between platforms

If your primary concern is short‑term discomfort, mRNA vaccines are more likely to cause stronger but brief symptoms; if you worry about exceedingly rare immune or clotting complications, adenoviral‑vector vaccines like Janssen have been associated with different, very rare signals (GBS, thrombotic events) that regulators have highlighted [3] [8] [4]. All sources underline that serious adverse events are rare and that vaccination substantially reduces the risk of severe COVID‑19 outcomes [13] [14].

Want to dive deeper?
What are common short-term side effects of Janssen vs Pfizer and Moderna?
How does risk of blood clots with Janssen compare to myocarditis risk with mRNA vaccines?
Are long-term adverse event rates different between Janssen and mRNA COVID-19 vaccines?
How do side effects differ by age, sex, and dose interval for Janssen versus mRNA vaccines?
What do regulatory agencies recommend about choosing Janssen or mRNA vaccines based on safety profiles?